View source for BioLib Staden io lib

Staden io_lib is the support library for the [http://staden.sourceforge.net/ Staden assembly programs] (like gap4, trace, makescf...).

The call examples for ''Perl'', ''Python'' and ''Ruby'' can be found in the [http://thebird.nl/apidoc/biolib/index.html apidoc].

BioLib maps the read and write functions for different trace formats as defined in the Read.h file:

 /* Trace file formats */
 #define TT_ERR -1
 #define TT_UNK 0
 #define TT_SCF 1
 #define TT_ABI 2
 #define TT_ALF 3
 #define TT_PLN 4
 #define TT_EXP 5
 #define TT_CTF 6
 #define TT_ZTR 7
 #define TT_ZTR1 8
 #define TT_ZTR2 9
 #define TT_ZTR3 10
 #define TT_BIO 11
 #define TT_SFF 12
 #define TT_ANY TT_UNK

so any format can be read, or converted to another using the Bio* languages.

* For the current API see [[Main Page#DOCUMENTION]]